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Resource-Centered Distributed Processing of Large Histopathology Images

  • Daniel Salas
  • , Jens Gustedt
  • , Daniel Racoceanu
  • , Isabelle Perseil
  • Inserm
  • INRIA Institut National de Recherche en Informatique et en Automatique
  • Université de Strasbourg
  • Sorbonne Université

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

Abstract

Automatic cell nuclei detection is a real challenge in medical imagery. The Marked Point Process (MPP) is one of the most promising scalable and paralellizable method. To handle large histopathology images, the algorithm has to be distributed. A new parallelization paradigm called Ordered Read-Write Locks (ORWL) is presented as a possible solution for solving some of the unwanted side effects of the distribution, namely an imprecision of the results on the internal boundaries of partitioned images. This solution extends a parallel version of MPP that has reached good speedups on GPU cards, but was not scaling to complete images as they appear in practical data.

Original languageEnglish
Title of host publicationProceedings - 19th IEEE International Conference on Computational Science and Engineering, 14th IEEE International Conference on Embedded and Ubiquitous Computing and 15th International Symposium on Distributed Computing and Applications to Business, Engineering and Science, CSE-EUC-DCABES 2016
PublisherInstitute of Electrical and Electronics Engineers Inc.
Pages367-370
Number of pages4
ISBN (Electronic)9781509035939
DOIs
StatePublished - 14 Jul 2017
Externally publishedYes
Event19th IEEE International Conference on Computational Science and Engineering, 14th IEEE International Conference on Embedded and Ubiquitous Computing and 15th International Symposium on Distributed Computing and Applications to Business, Engineering and Science, CSE-EUC-DCABES 2016 - Paris, France
Duration: 24 Aug 201626 Aug 2016

Publication series

NameProceedings - 19th IEEE International Conference on Computational Science and Engineering, 14th IEEE International Conference on Embedded and Ubiquitous Computing and 15th International Symposium on Distributed Computing and Applications to Business, Engineering and Science, CSE-EUC-DCABES 2016

Conference

Conference19th IEEE International Conference on Computational Science and Engineering, 14th IEEE International Conference on Embedded and Ubiquitous Computing and 15th International Symposium on Distributed Computing and Applications to Business, Engineering and Science, CSE-EUC-DCABES 2016
Country/TerritoryFrance
CityParis
Period24/08/1626/08/16

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